Gee, John. "Telling the Story of the Joseph Smith Papyri." FARMS Review of Books 8, no. 2 (1996): 46-59.

Gee, John. A History of the Joseph Smith Papyri and Book of Abraham. Provo, UT: Foundation for Ancient Research and Mormon Studies, 1999.

Gee, John. The Ancient Owners of the Joseph Smith Papyri. Provo, UT: Foundation for Ancient Research and Mormon Studies, 1999.

Astronomy, Papyrus, and Covenant In Studies in the Book of Abraham, Edited by John Gee and Brian M. Hauglid. Provo, UT: Foundation for Ancient Research and Mormon Studies, Brigham Young University, 2005.

Gee, John. "New Light on the Joseph Smith Papyri." The FARMS Review 19, no. 2 (2007): 245-259.

Gee, John. "Some Puzzles from the Joseph Smith Papyri." The FARMS Review 20, no. 1 (2008): 113-137.

Gee, John. "Eyewitness, Hearsay, and Physical Evidence of the Joseph Smith Papyri." In The Disciple as Witness: Essays on Latter-day Saint History and Doctrine in Honor of Richard Lloyd Anderson, edited by Stephen D. Ricks, Donald W. Parry and Andrew H. Hedges, 175-217. Provo, UT: Foundation for Ancient Research and Mormon Studies, 2000.