Hovorka, Janet. "Sarah and Hagar: Ancient Women of the Abrahamic Covenant." In Astronomy, Papyrus, and Covenant, edited by John Gee and Brian M. Hauglid, 147-166. Provo, UT: Foundation for Ancient Research and Mormon Studies, Brigham Young University, 2005.

Tvedtnes, John A., John Gee, and Matthew Roper. "Book of Mormon Names Attested in Ancient Hebrew Inscriptions." Journal of Book of Mormon Studies 9, no. 1 (2000): 40-51, 78-79.

Gee, John. "A Different Way of Seeing the Hand of the Lord." Religious Educator: Perspectives on the Restored Gospel 16, no. 2 (2015): 11-127.

Tvedtnes, John A., John Gee, and Matthew Roper. "Book of Mormon Names Attested in Ancient Hebrew Inscriptions." Journal of Book of Mormon Studies 9, no. 1 (2000): 40-51, 78-79.

Gee, John. "La Trahison des Clercs: On the Language and Translation of the Book of Mormon." Review of Books on the Book of Mormon 6, no. 1 (1994): 51-120.

Peterson, Daniel C., and John Gee. "Editor's Introduction: Through a Glass, Darkly." FARMS Review of Books 9, no. 2 (1997): v-xxix.

Gee, John. "The Old Testament as Reliable History." The FARMS Review 18, no. 1 (2006): 425-430.

Gee, John. "The Implications of Some Standard Assumptions of New Testament Scholars: Responding to a Modern Anti-Christ." Interpreter: A Journal of Latter-day Saint Faith and Scholarship 46 (2021): 15-32.

Gee, John, and Daniel C. Peterson. "Graft and Corruption: On Olives and Olive Culture in the Pre-Modern Mediterranean." In The Allegory of the Olive Tree: The Olive, the Bible, and Jacob 5, edited by Stephen D. Ricks and John W. Welch, 186-247. Provo, UT/Salt Lake City: Foundation for Ancient Research and Mormon Studies/Deseret Book, 1994.